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Journal Articles

Splicing under stress: A matter of time and place

Paulina Podszywalow-Bartnicka, Karla M. Neugebauer
Journal: Journal of Cell Biology
J Cell Biol (2023) 222 (12): e202311014.
https://doi.org/10.1083/jcb.202311014
Published: 21 November 2023
View article titled, Splicing under stress: A matter of time and place
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Journal Articles

Stress-induced nuclear speckle reorganization is linked to activation of immediate early gene splicing

Hsu-Min Sung, Johanna Schott, Philipp Boss, Janina A. Lehmann, Marius Roland Hardt, Doris Lindner, Joris Messens, Ivan Bogeski, Uwe Ohler, Georg Stoecklin
Journal: Journal of Cell Biology
J Cell Biol (2023) 222 (12): e202111151.
https://doi.org/10.1083/jcb.202111151
Published: 13 November 2023
View article titled, Stress-induced nuclear speckle reorganization is linked to activation of immediate early gene splicing
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Includes: Supplementary data
Journal Articles

The role of midbody-associated mRNAs in regulating abscission

Trey Farmer, Katherine F. Vaeth, Ke-Jun Han, Raeann Goering, Matthew J. Taliaferro, Rytis Prekeris
Journal: Journal of Cell Biology
J Cell Biol (2023) 222 (12): e202306123.
https://doi.org/10.1083/jcb.202306123
Published: 03 November 2023
View article titled, The role of midbody-associated mRNAs in regulating abscission
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Includes: Supplementary data
Journal Articles

Rie1 and Sgn1 form an RNA-binding complex that enforces the meiotic entry cell fate decision

Alec Gaspary, Raphaelle Laureau, Annie Dyatel, Gizem Dursuk, Yael Simon, Luke E. Berchowitz
Journal: Journal of Cell Biology
J Cell Biol (2023) 222 (11): e202302074.
https://doi.org/10.1083/jcb.202302074
Published: 28 August 2023
View article titled, Rie1 and Sgn1 form an RNA-binding complex that enforces the meiotic entry cell fate decision
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Includes: Supplementary data
Journal Articles

Tejas functions as a core component in nuage assembly and precursor processing in Drosophila piRNA biogenesis

Yuxuan Lin, Ritsuko Suyama, Shinichi Kawaguchi, Taichiro Iki, Toshie Kai
Journal: Journal of Cell Biology
J Cell Biol (2023) 222 (10): e202303125.
https://doi.org/10.1083/jcb.202303125
Published: 09 August 2023
View article titled, Tejas functions as a core component in nuage assembly and precursor processing in <em>Drosophila</em> piRNA biogenesis
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Includes: Supplementary data
Journal Articles

An RNA-based feed-forward mechanism ensures motor switching in oskar mRNA transport

Imre Gáspár, Ly Jane Phea, Mark A. McClintock, Simone Heber, Simon L. Bullock, Anne Ephrussi
Journal: Journal of Cell Biology
J Cell Biol (2023) 222 (7): e202301113.
https://doi.org/10.1083/jcb.202301113
Published: 22 May 2023
View article titled, An RNA-based feed-forward mechanism ensures motor switching in <em>oskar</em> mRNA transport
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Includes: Supplementary data
Journal Articles

Systematic analysis of YFP traps reveals common mRNA/protein discordance in neural tissues

In Special Collection:
Cellular Neurobiology 2023
Joshua S. Titlow, Maria Kiourlappou, Ana Palanca, Jeffrey Y. Lee, Dalia S. Gala, Darragh Ennis, Joyce J.S. Yu, Florence L. Young, David Miguel Susano Pinto, Sam Garforth, Helena S. Francis, Finn Strivens, Hugh Mulvey, Alex Dallman-Porter, Staci Thornton, Diana Arman, Marissa J. Millard, Aino I. Järvelin, Mary Kay Thompson, Martin Sargent, Ilias Kounatidis, Richard M. Parton, Stephen Taylor, Ilan Davis
Journal: Journal of Cell Biology
J Cell Biol (2023) 222 (6): e202205129.
https://doi.org/10.1083/jcb.202205129
Published: 05 May 2023
View article titled, Systematic analysis of YFP traps reveals common mRNA/protein discordance in neural tissues
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Includes: Supplementary data
Journal Articles

ADAD2 interacts with RNF17 in P-bodies to repress the Ping-pong cycle in pachytene piRNA biogenesis

Mengneng Xiong, Lisha Yin, Yiqian Gui, Chunyu Lv, Xixiang Ma, Shuangshuang Guo, Yanqing Wu, Shenglei Feng, Xv Fan, Shumin Zhou, Lingjuan Wang, Yujiao Wen, Xiaoli Wang, Qingzhen Xie, Satoshi H. Namekawa, Shuiqiao Yuan
Journal: Journal of Cell Biology
J Cell Biol (2023) 222 (5): e202206067.
https://doi.org/10.1083/jcb.202206067
Published: 17 March 2023
View article titled, ADAD2 interacts with RNF17 in P-bodies to repress the Ping-pong cycle in pachytene piRNA biogenesis
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Includes: Supplementary data
Journal Articles

Quality control ensures fidelity in ribosome assembly and cellular health

Melissa D. Parker, Katrin Karbstein
Journal: Journal of Cell Biology
J Cell Biol (2023) 222 (4): e202209115.
https://doi.org/10.1083/jcb.202209115
Published: 15 February 2023
View article titled, Quality control ensures fidelity in ribosome assembly and cellular health
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Journal Articles

Meiotic resetting of the cellular Sod1 pool is driven by protein aggregation, degradation, and transient LUTI-mediated repression

Helen M. Vander Wende, Mounika Gopi, Megan Onyundo, Claudia Medrano, Temiloluwa Adanlawo, Gloria Ann Brar
Journal: Journal of Cell Biology
J Cell Biol (2023) 222 (3): e202206058.
https://doi.org/10.1083/jcb.202206058
Published: 09 January 2023
View article titled, Meiotic resetting of the cellular Sod1 pool is driven by protein aggregation, degradation, and transient LUTI-mediated repression
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Includes: Supplementary data
Journal Articles

Real-time imaging of RNA polymerase I activity in living human cells

In Special Collection:
The Year in Cell Biology: 2023
Yujuan Fu, Yaxin Liu, Tanye Wen, Jie Fang, Yalong Chen, Ziying Zhou, Xinyi Gu, Hao Wu, Jinghao Sheng, Zhengping Xu, Wei Zou, Baohui Chen
Journal: Journal of Cell Biology
J Cell Biol (2022) 222 (1): e202202110.
https://doi.org/10.1083/jcb.202202110
Published: 25 October 2022
View article titled, Real-time imaging of RNA polymerase I activity in living human cells
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Includes: Supplementary data
Journal Articles

Prion-like domains drive CIZ1 assembly formation at the inactive X chromosome

In Special Collection:
Chromatin Biology 2022
Sajad Sofi, Louisa Williamson, Gabrielle L. Turvey, Charlotte Scoynes, Claire Hirst, Jonathan Godwin, Neil Brockdorff, Justin Ainscough, Dawn Coverley
Journal: Journal of Cell Biology
J Cell Biol (2022) 221 (4): e202103185.
https://doi.org/10.1083/jcb.202103185
Published: 15 March 2022
View article titled, Prion-like domains drive CIZ1 assembly formation at the inactive X chromosome
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Includes: Supplementary data
Journal Articles

Pluripotency exit is guided by the Peln1-mediated disruption of intrachromosomal architecture

Yichen Wang, Lin Jia, Cong Wang, Zhonghua Du, Shilin Zhang, Lei Zhou, Xue Wen, Hui Li, Huiling Chen, Yuanyuan Nie, Dan Li, Shanshan Liu, Daniela Salgado Figueroa, Ferhat Ay, Wei Xu, Songling Zhang, Wei Li, Jiuwei Cui, Andrew R. Hoffman, Hui Guo, Ji-Fan Hu
Journal: Journal of Cell Biology
J Cell Biol (2022) 221 (4): e202009134.
https://doi.org/10.1083/jcb.202009134
Published: 16 February 2022
View article titled, Pluripotency exit is guided by the <em>Peln1</em>-mediated disruption of intrachromosomal architecture
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Includes: Supplementary data
Journal Articles

Endosomal escape of delivered mRNA from endosomal recycling tubules visualized at the nanoscale

In Special Collection:
The Year in Cell Biology: 2022
Prasath Paramasivam, Christian Franke, Martin Stöter, Andreas Höijer, Stefano Bartesaghi, Alan Sabirsh, Lennart Lindfors, Marianna Yanez Arteta, Anders Dahlén, Annette Bak, Shalini Andersson, Yannis Kalaidzidis, Marc Bickle, Marino Zerial
Journal: Journal of Cell Biology
J Cell Biol (2021) 221 (2): e202110137.
https://doi.org/10.1083/jcb.202110137
Published: 09 December 2021
View article titled, Endosomal escape of delivered mRNA from endosomal recycling tubules visualized at the nanoscale
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Includes: Supplementary data
Journal Articles

TDP-43 mediates SREBF2-regulated gene expression required for oligodendrocyte myelination

In Special Collection:
Cellular Neurobiology 2021 , The Year in Cell Biology: 2021
Wan Yun Ho, Jer-Cherng Chang, Kenneth Lim, Amaury Cazenave-Gassiot, Aivi T. Nguyen, Juat Chin Foo, Sneha Muralidharan, Ashley Viera-Ortiz, Sarah J.M. Ong, Jin Hui Hor, Ira Agrawal, Shawn Hoon, Olubankole Aladesuyi Arogundade, Maria J. Rodriguez, Su Min Lim, Seung Hyun Kim, John Ravits, Shi-Yan Ng, Markus R. Wenk, Edward B. Lee, Greg Tucker-Kellogg, Shuo-Chien Ling
Journal: Journal of Cell Biology
J Cell Biol (2021) 220 (9): e201910213.
https://doi.org/10.1083/jcb.201910213
Published: 04 August 2021
View article titled, TDP-43 mediates SREBF2-regulated gene expression required for oligodendrocyte myelination
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Includes: Supplementary data
Journal Articles

Catalytically inactive, purified RNase H1: A specific and sensitive probe for RNA–DNA hybrid imaging

Magdalena P. Crossley, Joshua R. Brickner, Chenlin Song, Su Mon Thin Zar, Su S. Maw, Frédéric Chédin, Miaw-Sheue Tsai, Karlene A. Cimprich
Journal: Journal of Cell Biology
J Cell Biol (2021) 220 (9): e202101092.
https://doi.org/10.1083/jcb.202101092
Published: 07 July 2021
View article titled, Catalytically inactive, purified RNase H1: A specific and sensitive probe for RNA–DNA hybrid imaging
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Journal Articles

Recognition of RNA by the S9.6 antibody creates pervasive artifacts when imaging RNA:DNA hybrids

John A. Smolka, Lionel A. Sanz, Stella R. Hartono, Frédéric Chédin
Journal: Journal of Cell Biology
J Cell Biol (2021) 220 (6): e202004079.
https://doi.org/10.1083/jcb.202004079
Published: 08 April 2021
View article titled, Recognition of RNA by the S9.6 antibody creates pervasive artifacts when imaging RNA:DNA hybrids
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Journal Articles

miR-146 connects stem cell identity with metabolism and pharmacological resistance in breast cancer

In Special Collection:
Cancer Cell Biology 2022
Chiara Tordonato, Matteo Jacopo Marzi, Giovanni Giangreco, Stefano Freddi, Paola Bonetti, Daniela Tosoni, Pier Paolo Di Fiore, Francesco Nicassio
Journal: Journal of Cell Biology
J Cell Biol (2021) 220 (5): e202009053.
https://doi.org/10.1083/jcb.202009053
Published: 02 April 2021
View article titled, miR-146 connects stem cell identity with metabolism and pharmacological resistance in breast cancer
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Includes: Supplementary data
Journal Articles

Parameter-free molecular super-structures quantification in single-molecule localization microscopy

Mattia Marenda, Elena Lazarova, Sebastian van de Linde, Nick Gilbert, Davide Michieletto
Journal: Journal of Cell Biology
J Cell Biol (2021) 220 (5): e202010003.
https://doi.org/10.1083/jcb.202010003
Published: 18 March 2021
View article titled, Parameter-free molecular super-structures quantification in single-molecule localization microscopy
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Includes: Supplementary data
Journal Articles

High-fidelity reconstitution of stress granules and nucleoli in mammalian cellular lysate

In Special Collection:
Tools Collection 2023
Brian D. Freibaum, James Messing, Peiguo Yang, Hong Joo Kim, J. Paul Taylor
Journal: Journal of Cell Biology
J Cell Biol (2021) 220 (3): e202009079.
https://doi.org/10.1083/jcb.202009079
Published: 27 January 2021
View article titled, High-fidelity reconstitution of stress granules and nucleoli in mammalian cellular lysate
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Includes: Supplementary data