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Journal Articles
Jianshu Hu, Elisa Venturi, Charalampos Sigalas, Takashi Murayama, Miyuki Nishi, Hiroshi Takeshima, Rebecca Sitsapesan
Journal:
Journal of General Physiology
Series: Excitation–Contraction Coupling
J Gen Physiol (2023) 155 (11): e202113070.
Published: 26 September 2023
Includes: Supplementary data
in The biophysical properties of TRIC-A and TRIC-B and their interactions with RyR2
> Journal of General Physiology
Published: 26 September 2023
Images
in The biophysical properties of TRIC-A and TRIC-B and their interactions with RyR2
> Journal of General Physiology
Published: 26 September 2023
Figure 1. The effects of coexpressing TRIC-A or TRIC-B with RyR2 on the function of RyR2 channels incorporated into bilayers at 2 μM free Ca 2+ . (A) Representative current fluctuations of RyR2 channels from the HEK293 cells expressing RyR2-only (left), RyR2+TRIC-A (middle), and RyR2+TRIC-B (right) at the holding potentials of ±30 mV in symmetrical 210 mM KPIPES, 2 μM free Ca2+. The Po (measured over 2 min) is shown above each trace. The zero current level is indicated by C, a single full open channel level by O1, and double full open channel level by O2. The red asterisks highlight subconductance events. (B) Single-channel K+ conductance of RyR2 channels from HEK293 cells expressing RyR2-only (black circles), RyR2+TRIC-A (blue squares), and RyR2+TRIC-B (red triangles) in the same solutions as in A. The amplitudes in I–V curve of conductance were measured from multiple traces at ±30 and 0 mV. One-way ANOVA for the independent variable, “type of HEK293 cells,” is not significant with P = 0.72 (nRyR2 = 10, nRyR2+TRIC-A = 7, nRyR2+TRIC-B = 10). Symbols indicate values from individual experiments and bars indicate mean ± SEM. More about this image found in The effects of coexpressing TRIC-A or TRIC-B with RyR2 on the function of R...
Images
in The biophysical properties of TRIC-A and TRIC-B and their interactions with RyR2
> Journal of General Physiology
Published: 26 September 2023
Figure 2. The effects of coexpressing TRIC-A or TRIC-B with RyR2 on the response of RyR2 channels to increasing cytosolic [Ca 2+ ]. Typical gating behavior of RyR2 is shown from the HEK293 cells expressing RyR2-only (left), RyR2+TRIC-A (middle), and RyR2+TRIC-B (right) at −30 mV in symmetrical 210 mM KPIPES, at the indicated free [Ca2+]. In symmetrical 210 mM KPIPES and 10 µM cytosolic Ca2+, RyR single-channel conductance from the RyR2-only, RyR2+TRIC-A, and RyR2+TRIC-B cells was 735.7 ± 12.7 pS, 735.0 ± 19.2 pS, and 726.3 ± 9.0 pS, respectively. When cytosolic Ca2+ was raised to 1 mM, RyR conductance decreased to 544 ± 22 pS, 549 ± 34 pS, and 557 ± 10 pS for RyR2-only, RyR2+TRIC-A, and RyR2+TRIC-B cells, respectively (nRyR2 = 10, nRyR2+TRIC-A = 7, nRyR2+TRIC-B = 10). The Po (measured over 2 min) is shown above each trace. The zero current level is indicated by C and the fully open channel levels by O1 and O2. The red asterisk highlights subconductance events. More about this image found in The effects of coexpressing TRIC-A or TRIC-B with RyR2 on the response of R...
Images
in The biophysical properties of TRIC-A and TRIC-B and their interactions with RyR2
> Journal of General Physiology
Published: 26 September 2023
Figure 3. The effects of co-expressing TRIC-A or TRIC-B with RyR2 on the relationship between Po and cytosolic [Ca 2+ ]. (A) Relationship between [Ca2+] and Po for RyR2 derived from HEK293 cells expressing RyR2-only (black), RyR2+TRIC-A (blue), and RyR2+TRIC-B (red) at −30 mV. Lines display non-linear bell-shaped fitted curves. EC50 values are 3.6 µM for RyR2-only, 5.8 µM for RyR2+TRIC-A, and 11.7 µM for RyR2+TRIC-B, and IC50 values are 87 µM for RyR2-only, 1.08 mM for RyR2+TRIC-A, and 0.84 mM for RyR2+TRIC-B. (B) The effect of holding potential (−30 mV on the left; +30 mV on the right) on Po for RyR2 derived from HEK293 cells expressing RyR2-only (black), RyR2+TRIC-A (blue), and RyR2+TRIC-B (red). For the statistical analysis, we used a linear mixed model with two independent variables: (1) “cytosolic [Ca2+]” and (2) “type of HEK293 cells.” To preserve correlations within recordings, a Random Effects factor was included in the model that determined the identity of the single-channel recording for each measurement (as discussed in Materials and methods). For the −30 mV on the left: interaction effect for cytosolic [Ca2+] by type of HEK293 cells P = 0.000008; main effect of cytosolic [Ca2+], P = 4.794 × 10−11; main effect of type of HEK293 cells, P = 0.000025 (nRyR2 = 6, nRyR2+TRIC-A = 3–8, nRyR2+TRIC-B = 13). Adjusted P values (Sidak correction) for simple effects are listed in Tables S1 and S2 . For the +30 mV on the right: interaction effect for cytosolic [Ca2+] by type of HEK293 cells, P = 0.0219; main effect of cytosolic [Ca2+], P = 0.0024; main effect of type of HEK293 cells; P = 0.0423 (nRyR2 = 6, nRyR2+TRIC-A = 4–5, nRyR2+TRIC-B = 6). Adjusted P values (Sidak correction) for simple effects are listed in Tables S3 and S4 . Simple effects tests for type of HEK293 cells comparing (1) RyR2-only, (2) RyR2+TRIC-A, and (3) RyR2+TRIC-B are indicated by asterisks (*: P < 0.05; **: P < 0.01; ***: P < 0.001; ****: P < 0.0001). Values are of the mean ± SEM. More about this image found in The effects of co-expressing TRIC-A or TRIC-B with RyR2 on the relationship...
Images
in The biophysical properties of TRIC-A and TRIC-B and their interactions with RyR2
> Journal of General Physiology
Published: 26 September 2023
Figure 4. Voltage-dependent inactivation of RyR2. (A) Example of voltage-dependent inactivation of RyR2 channels that results from switching the holding potential from −30 to +30 mV in a bilayer where multiple RyR2 channels were gated prior to the voltage change. The blue arrow indicates the time of the voltage change and the orange arrows indicate the times of individual channel inactivation. The dashed line indicates 0 pA. (B) Graph comparing the times to channel inactivation after changing the holding potential from −30 to +30 mV in the RyR2 derived from HEK293 cells expressing RyR2-only (black), RyR2+TRIC-A (blue), and RyR2+TRIC-B (red). The curves were fitted according to the equation: y = n ( 1 − e − k t ) , where t = time in seconds, n is the number of channels (nRyR2 = 15, nRyR2+TRIC-A = 15, nRyR2+TRIC-B = 18), and k is the rate constant (kRyR2 = 0.264, kRyR2+TRIC-A = 0.422, kRyR2+TRIC-B = 4.89). The time for half the channels to become inactivated (half decay time, t1/2) was 2.62, 1.64, and 0.14 s for RyR2-only, RyR2+TRIC-A, and RyR2+TRIC-B, respectively. Kruskal–Wallis test: P = 0.000003. Post-hoc multiple comparison with Dunn’s correction: significant difference between the t1/2 of RyR2 derived from HEK293 cells expressing RyR2+TRIC-B and the t1/2 of cells expressing RyR2-only (indicated by **** for P = 0.000007) or RyR2+TRIC-A (indicated by *** for P = 0.000483). More about this image found in Voltage-dependent inactivation of RyR2. (A) Example of voltage-dependent i...
Images
in The biophysical properties of TRIC-A and TRIC-B and their interactions with RyR2
> Journal of General Physiology
Published: 26 September 2023
Figure 5. The effects of co-expressing TRIC-A or TRIC-B with RyR2 on the frequency of subconductance events. Bar chart showing the frequency of subconductance open events >2 ms in duration at 10 µM cytosolic free [Ca2+] at −30 mV, in the same solutions as in Fig. 2 , for RyR2 derived from HEK293 cells expressing RyR2-only (black), RyR2+TRIC-A (blue), and RyR2+TRIC-B (red). The Kruskal–Wallis test for one independent variable, type of cell, P = 0.0271. Post-hoc multiple comparison with Dunn’s correction: significant difference between the event frequency of RyR2 derived from HEK293 cells expressing RyR2-only or cells expressing RyR2+TRIC-A is indicated by * for P = 0.0287 (nRyR2 = 6, nRyR2+TRIC-A = 6, nRyR2+TRIC-B = 8). Symbols indicate values from individual experiments and bars show mean ± SEM. More about this image found in The effects of co-expressing TRIC-A or TRIC-B with RyR2 on the frequency of...
Images
in The biophysical properties of TRIC-A and TRIC-B and their interactions with RyR2
> Journal of General Physiology
Published: 26 September 2023
Figure 6. Comparison of mouse skeletal SR K + single-channel events with those derived from HEK293 cell vesicles coexpressing TRIC-A or TRIC-B with RyR2 and with detergent-purified TRIC-B. (A) Typical SR K+ channel openings were observed after incorporating mouse skeletal muscle SR vesicles into bilayers in symmetrical 210 mM KPIPES, 2 µM free Ca2+ at the holding potential of +30 mV. The zero current level is indicated by “closed” and the fully open channel level by “open.” The orange and blue arrows indicate the characteristic rapidly gating subconductance states and slower gating full conductance openings. So that direct comparison can be made with the TRIC channel currents under identical recording conditions, B–D indicate the amplitude of a full SR K+ channel opening with a black arrow and the zero current level with “closed.” (B) Example of the currents observed after incorporating vesicles from HEK293 cells coexpressing RyR2+TRIC-A under the same experimental conditions as in A. (C) Example of the currents observed after incorporating vesicles from HEK293 cells coexpressing RyR2+TRIC-B under the same experimental conditions as in A. (D) Example of current fluctuations obtained after bilayer incorporation of CHAPS-purified TRIC-B channels expressed in yeast under the same experimental conditions as in A. More about this image found in Comparison of mouse skeletal SR K + single-channel events with...
Images
in The biophysical properties of TRIC-A and TRIC-B and their interactions with RyR2
> Journal of General Physiology
Published: 26 September 2023
Figure 7. Effect of co-expressing TRIC-A or TRIC-B on background currents. (A) The bar chart illustrates the percentage of the bilayer in which no background current was detected after the incorporation of vesicles from HEK293 cells expressing RyR2-only, RyR2+TRIC-A, and RyR2+TRIC-B. Significant differences were detected across the three groups using a χ-square test with a P value of 0.000065. The percentage of bilayers with no background current is indicated in each bar (total number of bilayers: nRyR2 = 21, nRyR2+TRIC-A = 24, nRyR2+TRIC-B = 26). (B) Mean current amplitudes in KCl gradient conditions after vesicles incorporation are compared for HEK293 cells expressing RyR2-only, RyR2+TRIC-A, and RyR2+TRIC-B. One-way ANOVA: P = 0.000065. Post-hoc multiple comparison with Tukey’s correction: significant differences between RyR2-only and RyR2+TRIC-A vesicle preparations are indicated by *** for P = 0.0003 and between the RyR2+TRIC-A and RyR2+TRIC-B indicated by *** with P = 0.0005 (nRyR2 = 21, nRyR2+TRIC-A = 24, nRyR2+TRIC-B = 26). Symbols indicate values from individual experiments and bars indicate mean ± SEM. More about this image found in Effect of co-expressing TRIC-A or TRIC-B on background currents. (A) The b...
Images
in The biophysical properties of TRIC-A and TRIC-B and their interactions with RyR2
> Journal of General Physiology
Published: 26 September 2023
Figure 8. Effects of coexpressing TRIC-A or TRIC-B with RyR2 on the currents elicited by voltage ramps. (A) Representative current fluctuations from individual experiments after incorporating vesicles from HEK293 cells expressing only RyR2 in which a single RyR2 channel was incorporated (black) or when a background current was detected (green). The black (RyR2-only) and green (background current) arrows indicate the Erev for the individual experiment. (B) Representative currents from individual experiments after incorporating vesicles from HEK293 cells coexpressing RyR2+TRIC-A (blue) or coexpressing RyR2+TRIC-B (red) into the bilayer. The blue (RyR2+TRIC-A) and red (RyR2+TRIC-B) arrows indicate the Erev for the corresponding experiment. Vesicles were incubated with the bilayer for 5–10 min in 740 mM cytosolic:210 mM luminal KCl gradient to allow multiple fusion events (evidenced by step changes in conductance) to occur. Vesicle fusion was halted by perfusing the cytosolic chamber with 210 mM KCl. The 740 mM cytosolic:210 mM luminal KCl gradient was then reapplied. The bilayers were held at 0 mV and then switched to −50 mV for 1 s before applying the voltage ramp (red) from −50 to +50 mV. More about this image found in Effects of coexpressing TRIC-A or TRIC-B with RyR2 on the currents elicited...
Images
in The biophysical properties of TRIC-A and TRIC-B and their interactions with RyR2
> Journal of General Physiology
Published: 26 September 2023
Figure 9. Effect of coexpressing TRIC-A or TRIC-B with RyR2 on the reversal potential. The mean Erev values obtained after the application of a voltage ramp are compared for RyR2+TRIC-A (blue squares; n =11) and RyR2+TRIC-B (red triangles; n = 13) vesicle preparations. Ramp currents were recorded in triplicates for each bilayer experiment and the three Erevs measured were averaged and plotted as a single data point. An unpaired t test gives P = 0.0055, indicated by **. Symbols indicate values from individual experiments and bars indicate mean ± SEM. More about this image found in Effect of coexpressing TRIC-A or TRIC-B with RyR2 on the reversal potential...
Images
in The biophysical properties of TRIC-A and TRIC-B and their interactions with RyR2
> Journal of General Physiology
Published: 26 September 2023
Figure 10. Example of single-channel recordings of TRIC-B expressed in wheat germ. (A) Liposomes containing TRIC-B expressed in the wheat germ system were fused into bilayers under KCl gradient conditions (740 mM KCl cis; 210 mM KCl trans), 2 µM free Ca2+. The recording illustrates the typical multiple-channel fluctuations observed in the KCl gradient and at holding potentials of +40 and −40 mV. The dashed line represents the zero current level. The large current observed at −40 mV indicates that TRIC-B is predominantly permeable to Cl− ions. (B) Example of current fluctuations of TRIC-B from wheat germ during the application of a voltage ramp under gradient (pink trace) conditions. Erev is indicated by the arrow. (C) The mean Erev values for each bilayer are shown for RyR2+TRIC-B (red triangles; n = 13; data from Fig. 9 ), RyR2+TRIC-B without outliers (orange triangles; n = 11) and TRIC-B expressed in wheat germ (pink squares; n = 8). One-way ANOVA shows no significant difference with P value = 0.3678. More about this image found in Example of single-channel recordings of TRIC-B expressed in wheat germ. (A)...
in The biophysical properties of TRIC-A and TRIC-B and their interactions with RyR2
> Journal of General Physiology
Published: 26 September 2023
in The biophysical properties of TRIC-A and TRIC-B and their interactions with RyR2
> Journal of General Physiology
Published: 26 September 2023
Journal Articles
Journal:
Journal of General Physiology
J Gen Physiol (2023) 155 (11): e202313418.
Published: 20 September 2023
Journal Articles
Journal:
Journal of General Physiology
J Gen Physiol (2023) 155 (12): e202213261.
Published: 20 September 2023
Includes: Supplementary data
Journal Articles
Journal:
Journal of General Physiology
Series: Excitation–Contraction Coupling
J Gen Physiol (2023) 155 (11): e202213109.
Published: 20 September 2023
Journal Articles
Disease-associated KCNMA1 variants decrease circadian clock robustness in channelopathy mouse models
Journal:
Journal of General Physiology
J Gen Physiol (2023) 155 (11): e202313357.
Published: 20 September 2023
Includes: Supplementary data
Images
in Mechanisms of dihydropyridine agonists and antagonists in view of cryo-EM structures of calcium and sodium channels
> Journal of General Physiology
Published: 20 September 2023
Figure 1. DHPs in complexes with calcium channels. (A) Structure of the DHP antagonist R-Bay k 8644. The dihydropyridine ring has a flattened-boat conformation with the polar group NO2 at the starboard, the hydrophobic group COOCH3 at the portside, and phenyl-trifluoromethyl group at the bowsprit. (B) Localization of the DHP binding site in the interface between repeats III and IV. The selectivity filter (SF) and the activation gate regions are marked. (C and D) Intracellular (C) and membrane (D) views of 3-D-aligned structures of DHP-bound calcium channels (PDB IDs: 6jp5 , 6jp8 , 7jpl , and 7jpw ). The backbone helices are shown only for the Cav1.1 channel with R-Bay k 8644 ( 7jpw ). Repeats I, II, III, and IV are colored green, yellow, cyan, and magenta, respectively. A calcium ion in the SF region is shown as a blue sphere. (E) Structure of the Cav1.1 channel with the DHP antagonist nifedipine ( 6jp5 ) bound in the fenestration between repeats III and IV. Surrounding residues from helices P1III, S6III, and S6IV are shown as thin sticks. More about this image found in DHPs in complexes with calcium channels. (A) Structure of the DHP antagoni...
Images
in Mechanisms of dihydropyridine agonists and antagonists in view of cryo-EM structures of calcium and sodium channels
> Journal of General Physiology
Published: 20 September 2023
Figure 2. Interactions of DHP ligands with helix S6 IV in MC-minimized structures . (A) The portside methoxy group of antagonist R-Bay k 8644 fits in the hydrophobic pocket between Ala4i15 and Ile4i19 (7jpw-based model). (B) A small NO2 group of agonist S-Bay k 8644 does not fill up the pocket, leaving a void space (7jpl-based model). (C) The void space in the 7jpl-based model is filled up by a water molecule that donates two H-bonds to the NO2 group of the agonist. More about this image found in Interactions of DHP ligands with helix S6 IV in MC-minimized s...
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